Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GLE_0248 | GLE_3391 | GLE_0248 | GLE_3391 | Sporulation and cell division repeat protein. | Hypothetical protein. | 0.713 |
GLE_0248 | GLE_3392 | GLE_0248 | GLE_3392 | Sporulation and cell division repeat protein. | Transglycosylase family protein. | 0.713 |
GLE_0248 | ftsI | GLE_0248 | GLE_4136 | Sporulation and cell division repeat protein. | Penicillin binding protein; Catalyzes cross-linking of the peptidoglycan cell wall at the division septum; Belongs to the transpeptidase family. FtsI subfamily. | 0.893 |
GLE_0248 | mrdA | GLE_0248 | GLE_4510 | Sporulation and cell division repeat protein. | Penicillin binding protein; Catalyzes cross-linking of the peptidoglycan cell wall. Belongs to the transpeptidase family. MrdA subfamily. | 0.474 |
GLE_3391 | GLE_0248 | GLE_3391 | GLE_0248 | Hypothetical protein. | Sporulation and cell division repeat protein. | 0.713 |
GLE_3391 | GLE_3392 | GLE_3391 | GLE_3392 | Hypothetical protein. | Transglycosylase family protein. | 0.773 |
GLE_3391 | accA | GLE_3391 | GLE_3390 | Hypothetical protein. | acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA. | 0.600 |
GLE_3391 | ftsI | GLE_3391 | GLE_4136 | Hypothetical protein. | Penicillin binding protein; Catalyzes cross-linking of the peptidoglycan cell wall at the division septum; Belongs to the transpeptidase family. FtsI subfamily. | 0.469 |
GLE_3391 | mrcA | GLE_3391 | GLE_0931 | Hypothetical protein. | Penicillin-binding protein 1A. | 0.488 |
GLE_3391 | mrdA | GLE_3391 | GLE_4510 | Hypothetical protein. | Penicillin binding protein; Catalyzes cross-linking of the peptidoglycan cell wall. Belongs to the transpeptidase family. MrdA subfamily. | 0.469 |
GLE_3392 | GLE_0248 | GLE_3392 | GLE_0248 | Transglycosylase family protein. | Sporulation and cell division repeat protein. | 0.713 |
GLE_3392 | GLE_3391 | GLE_3392 | GLE_3391 | Transglycosylase family protein. | Hypothetical protein. | 0.773 |
GLE_3392 | accA | GLE_3392 | GLE_3390 | Transglycosylase family protein. | acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA. | 0.584 |
GLE_3392 | ftsI | GLE_3392 | GLE_4136 | Transglycosylase family protein. | Penicillin binding protein; Catalyzes cross-linking of the peptidoglycan cell wall at the division septum; Belongs to the transpeptidase family. FtsI subfamily. | 0.469 |
GLE_3392 | mrcA | GLE_3392 | GLE_0931 | Transglycosylase family protein. | Penicillin-binding protein 1A. | 0.488 |
GLE_3392 | mrdA | GLE_3392 | GLE_4510 | Transglycosylase family protein. | Penicillin binding protein; Catalyzes cross-linking of the peptidoglycan cell wall. Belongs to the transpeptidase family. MrdA subfamily. | 0.469 |
accA | GLE_3391 | GLE_3390 | GLE_3391 | acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA. | Hypothetical protein. | 0.600 |
accA | GLE_3392 | GLE_3390 | GLE_3392 | acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA. | Transglycosylase family protein. | 0.584 |
ftsI | GLE_0248 | GLE_4136 | GLE_0248 | Penicillin binding protein; Catalyzes cross-linking of the peptidoglycan cell wall at the division septum; Belongs to the transpeptidase family. FtsI subfamily. | Sporulation and cell division repeat protein. | 0.893 |
ftsI | GLE_3391 | GLE_4136 | GLE_3391 | Penicillin binding protein; Catalyzes cross-linking of the peptidoglycan cell wall at the division septum; Belongs to the transpeptidase family. FtsI subfamily. | Hypothetical protein. | 0.469 |
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