STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE_3398Hypothetical protein. (735 aa)    
Predicted Functional Partners:
GLE_1381
RNA methylase family; Belongs to the N(4)/N(6)-methyltransferase family.
  
     0.731
GLE_1394
Hypothetical protein.
  
     0.721
GLE_1281
Tetratricopeptide repeat domain protein.
  
     0.641
GLE_2029
Hypothetical protein.
  
     0.621
GLE_1454
Site-specific recombinase, integrase family.
  
     0.564
GLE_1452
RepB plasmid partitioning protein.
  
     0.534
GLE_2321
Acetyltransferase (GNAT) family.
  
     0.528
GLE_1133
Alpha/beta hydrolase fold.
  
     0.522
xseB
Exodeoxyribonuclease VII, small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.
       0.421
GLE_3397
Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family.
       0.421
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.