Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GLE_3405 | GLE_3406 | GLE_3405 | GLE_3406 | TldD/PmbA family protein. | Hypothetical protein. | 0.539 |
GLE_3405 | cafA | GLE_3405 | GLE_3407 | TldD/PmbA family protein. | Ribonuclease G. | 0.471 |
GLE_3405 | coaE | GLE_3405 | GLE_4119 | TldD/PmbA family protein. | dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family. | 0.789 |
GLE_3405 | maf-2 | GLE_3405 | GLE_3408 | TldD/PmbA family protein. | Septum formation protein Maf; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | 0.461 |
GLE_3405 | pmbA | GLE_3405 | GLE_3402 | TldD/PmbA family protein. | PmbA protein. | 0.849 |
GLE_3406 | GLE_3405 | GLE_3406 | GLE_3405 | Hypothetical protein. | TldD/PmbA family protein. | 0.539 |
GLE_3406 | cafA | GLE_3406 | GLE_3407 | Hypothetical protein. | Ribonuclease G. | 0.715 |
GLE_3406 | maf-2 | GLE_3406 | GLE_3408 | Hypothetical protein. | Septum formation protein Maf; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | 0.615 |
cafA | GLE_3405 | GLE_3407 | GLE_3405 | Ribonuclease G. | TldD/PmbA family protein. | 0.471 |
cafA | GLE_3406 | GLE_3407 | GLE_3406 | Ribonuclease G. | Hypothetical protein. | 0.715 |
cafA | maf-2 | GLE_3407 | GLE_3408 | Ribonuclease G. | Septum formation protein Maf; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | 0.750 |
coaE | GLE_3405 | GLE_4119 | GLE_3405 | dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family. | TldD/PmbA family protein. | 0.789 |
maf-2 | GLE_3405 | GLE_3408 | GLE_3405 | Septum formation protein Maf; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | TldD/PmbA family protein. | 0.461 |
maf-2 | GLE_3406 | GLE_3408 | GLE_3406 | Septum formation protein Maf; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | Hypothetical protein. | 0.615 |
maf-2 | cafA | GLE_3408 | GLE_3407 | Septum formation protein Maf; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | Ribonuclease G. | 0.750 |
pmbA | GLE_3405 | GLE_3402 | GLE_3405 | PmbA protein. | TldD/PmbA family protein. | 0.849 |