Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GLE_3406Hypothetical protein. (1462 aa)    
Predicted Functional Partners:
GLE_1337
Sporulation and cell division repeat protein.
  
     0.727
mreD
Rod shape-determining protein MreD; Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins. Belongs to the MreD family.
 
     0.725
GLE_1221
Hypothetical protein.
  
     0.717
GLE_0968
Lipoprotein.
 
     0.708
GLE_4930
Ankyrin repeat protein.
  
     0.697
GLE_0800
O-Antigen Polymerase.
  
    0.694
GLE_1684
Membrane protein.
  
     0.690
GLE_0293
Hypothetical protein.
  
     0.679
tolA
Protein TolA.
  
     0.675
lptD
LPS-assembly protein (Organic solvent tolerance protein); Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane.
  
     0.654
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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