STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GLE_3449Protein kinase domain. (673 aa)    
Predicted Functional Partners:
ribB
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
  
 
 0.925
GLE_1662
Protein phosphatase 2C.
 
 
 0.847
GLE_2588
Phosphoprotein phosphatase.
 
 
 0.846
GLE_3450
Hypothetical protein.
       0.697
GLE_0632
Sensory box histidine kinase.
    
 0.640
GLE_2589
Serine/threonine kinase family protein.
  
 
 
0.625
GLE_5446
Serine/threonine protein kinase.
  
 
 
0.624
pkn2-2
Serine/threonine-protein kinase Pkn2.
  
 
 
0.620
GLE_4894
Amino acid adenylation domain protein.
  
  
 0.566
GLE_3451
Hypothetical protein.
       0.545
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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