Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GLE_3474Oxidoreductase, short chain dehydrogenase/reductase family protein. (257 aa)    
Predicted Functional Partners:
GLE_3473
Hypothetical protein.
 
  
  0.807
GLE_4894
Amino acid adenylation domain protein.
  
 0.757
gltB
Glutamine amidotransferases class-II/glutamate synthase.
     
 0.728
GLE_2622
Isochorismatase.
 
 
 0.701
fadJ
Fatty acid oxidation complex subunit alpha.
  
 0.574
fadB
3-hydroxyacyl-CoA dehydrogenase.
  
 0.574
GLE_5043
acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
   
  0.554
GLE_2995
NAD dependent epimerase/dehydratase family.
   
 0.548
GLE_4967
Beta-ketoacyl synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
   
 0.517
GLE_3472
Transcriptional regulator, AraC family.
 
     0.516
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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