STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE_3501Hypothetical protein. (208 aa)    
Predicted Functional Partners:
GLE_3500
Phosphate transporter family.
 
  
 0.993
GLE_3502
Hypothetical protein.
       0.572
GLE_3504
Exopolysaccharide synthesis, ExoD.
       0.521
GLE_3503
Hemolysin.
 
     0.512
GLE_4177
General secretion pathway protein J.
  
     0.505
rpmB
Ribosomal protein L28.
  
    0.479
GLE_1667
Metallo-beta-lactamase domain protein.
  
     0.449
rnpA
Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.
   
    0.442
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
   
    0.422
GLE_5181
YceI like family; Belongs to the UPF0312 family.
  
     0.403
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.