STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE_3506Hypothetical protein. (324 aa)    
Predicted Functional Partners:
GLE_3505
Cyclic diguanylate phosphodiesterase/diguanylate cyclase.
    
  0.874
phnF
Phosphonates metabolism transcriptional regulator PhnF.
 
  
 0.859
GLE_1684
Membrane protein.
  
    0.695
GLE_0164
Sensory box histidine kinase.
    
 0.688
GLE_0632
Sensory box histidine kinase.
    
 0.676
GLE_4944
Phytase precursor.
  
     0.666
trmJ
RNA methyltransferase, TrmH family, group 1; Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA.
       0.647
GLE_0800
O-Antigen Polymerase.
  
     0.631
GLE_1121
Phytase precursor.
  
     0.628
phnM
Phosphonate metabolism protein PhnM.
 
  
 0.618
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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