STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE_3547Adenylate/guanylate cyclase. (310 aa)    
Predicted Functional Partners:
pkn2-2
Serine/threonine-protein kinase Pkn2.
 
 
   0.941
sucA
Oxoglutarate dehydrogenase, E1 component.
    
 
 0.846
GLE_3549
Histidine kinase.
       0.800
gltB
Glutamine amidotransferases class-II/glutamate synthase.
    
   0.708
GLE_0632
Sensory box histidine kinase.
 
 
 0.681
GLE_1546
Sensory box-containing diguanylate cyclase/cyclic diguanylate phosphodiesterase.
 
 
 0.671
GLE_3458
Cyclic diguanylate phosphodiesterase/diguanylate cyclase.
 
  
  0.619
GLE_3546
Lipoprotein.
       0.612
sctJ
Type III secretion apparatus lipoprotein.
  
  
 0.600
GLE_0164
Sensory box histidine kinase.
  
 
 0.580
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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