Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
pkn2-2Serine/threonine-protein kinase Pkn2. (1146 aa)    
Predicted Functional Partners:
GLE_3547
Adenylate/guanylate cyclase.
 
 
   0.934
GLE_1662
Protein phosphatase 2C.
 
 
 0.838
GLE_2588
Phosphoprotein phosphatase.
 
 
 0.836
GLE_3549
Histidine kinase.
       0.799
GLE_3449
Protein kinase domain.
  
 
 
0.620
GLE_3546
Lipoprotein.
       0.591
GLE_0632
Sensory box histidine kinase.
    
 0.577
GLE_3545
Peptidase, families S8 and S53.
 
 
   0.572
ribB
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
  
 
 0.555
GLE_3550
Two component transcriptional regulator, LuxR family.
       0.511
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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