GLE_3609 protein (Lysobacter enzymogenes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

GLE_3609

ABC transporter, ATP-binding protein. (333 aa)

Predicted Functional Partners:

GLE_3608

0.996

GLE_3610

0.953

GLE_3611

0.866

GLE_2106

0.843

GLE_3931

0.667

GLE_5023

0.569

GLE_4213

0.551

GLE_5219

0.519

cysN

0.511

GLE_5024

0.455

Your Current Organism:

Lysobacter enzymogenes

NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GLE_2106	GLE_3608	GLE_2106	GLE_3608	ABC transporter, permease protein, ABC-2 family.	ABC-2 type transporter.	0.546
GLE_2106	GLE_3609	GLE_2106	GLE_3609	ABC transporter, permease protein, ABC-2 family.	ABC transporter, ATP-binding protein.	0.843
GLE_2106	GLE_3610	GLE_2106	GLE_3610	ABC transporter, permease protein, ABC-2 family.	Secretion protein HlyD family protein.	0.768
GLE_3608	GLE_2106	GLE_3608	GLE_2106	ABC-2 type transporter.	ABC transporter, permease protein, ABC-2 family.	0.546
GLE_3608	GLE_3609	GLE_3608	GLE_3609	ABC-2 type transporter.	ABC transporter, ATP-binding protein.	0.996
GLE_3608	GLE_3610	GLE_3608	GLE_3610	ABC-2 type transporter.	Secretion protein HlyD family protein.	0.950
GLE_3608	GLE_3611	GLE_3608	GLE_3611	ABC-2 type transporter.	Transcriptional regulator, TetR family.	0.841
GLE_3609	GLE_2106	GLE_3609	GLE_2106	ABC transporter, ATP-binding protein.	ABC transporter, permease protein, ABC-2 family.	0.843
GLE_3609	GLE_3608	GLE_3609	GLE_3608	ABC transporter, ATP-binding protein.	ABC-2 type transporter.	0.996
GLE_3609	GLE_3610	GLE_3609	GLE_3610	ABC transporter, ATP-binding protein.	Secretion protein HlyD family protein.	0.953
GLE_3609	GLE_3611	GLE_3609	GLE_3611	ABC transporter, ATP-binding protein.	Transcriptional regulator, TetR family.	0.866
GLE_3609	GLE_3931	GLE_3609	GLE_3931	ABC transporter, ATP-binding protein.	Efflux ABC transporter, permease protein.	0.667
GLE_3609	GLE_4213	GLE_3609	GLE_4213	ABC transporter, ATP-binding protein.	ABC transporter, ATP-binding protein.	0.551
GLE_3609	GLE_5023	GLE_3609	GLE_5023	ABC transporter, ATP-binding protein.	Membrane protein.	0.569
GLE_3609	GLE_5024	GLE_3609	GLE_5024	ABC transporter, ATP-binding protein.	Membrane protein.	0.455
GLE_3609	GLE_5219	GLE_3609	GLE_5219	ABC transporter, ATP-binding protein.	Efflux ABC transporter, permease protein.	0.519
GLE_3609	cysN	GLE_3609	GLE_1238	ABC transporter, ATP-binding protein.	Bifunctional enzyme CysN/cysC; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.	0.511
GLE_3610	GLE_2106	GLE_3610	GLE_2106	Secretion protein HlyD family protein.	ABC transporter, permease protein, ABC-2 family.	0.768
GLE_3610	GLE_3608	GLE_3610	GLE_3608	Secretion protein HlyD family protein.	ABC-2 type transporter.	0.950
GLE_3610	GLE_3609	GLE_3610	GLE_3609	Secretion protein HlyD family protein.	ABC transporter, ATP-binding protein.	0.953