STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE_3610Secretion protein HlyD family protein. (382 aa)    
Predicted Functional Partners:
GLE_3609
ABC transporter, ATP-binding protein.
     0.954
GLE_3608
ABC-2 type transporter.
 
     0.949
GLE_3611
Transcriptional regulator, TetR family.
     0.944
GLE_2106
ABC transporter, permease protein, ABC-2 family.
 
     0.761
GLE_4689
RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family.
  
  0.552
GLE_0498
RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family.
  
  0.532
GLE_3264
Auxiliary transport protein, membrane fusion protein (MFP) family.
  
  
  0.480
GLE_3931
Efflux ABC transporter, permease protein.
  
   0.480
GLE_4210
Efflux ABC transporter, permease protein.
  
   0.475
GLE_5225
RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family.
  
  0.471
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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