Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GLE_36133-beta hydroxysteroid dehydrogenase/isomerase family protein. (339 aa)    
Predicted Functional Partners:
GLE_3612
Metallo-beta-lactamase domain protein.
     0.884
GLE_0202
AMP-binding enzyme.
 
 
 0.801
GLE_3614
Hypothetical protein.
       0.773
GLE_3615
3-oxoacyl-[acyl-carrier-protein (ACP)] synthase III.
       0.762
gltB
Glutamine amidotransferases class-II/glutamate synthase.
    
  0.724
dhlA
Haloalkane dehalogenase.
  
   
 0.705
GLE_5012
3-oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal.
 
     0.699
rpsS
Ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.
   
  0.679
rpsO
Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.
  
  0.671
rpsC
Ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.
   
  0.647
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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