Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| GLE_3618 | clpX | GLE_3618 | GLE_3418 | ATP-binding protein. | ATP-dependent Clp protease, ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. | 0.605 |
| GLE_3618 | cmk | GLE_3618 | GLE_2926 | ATP-binding protein. | Cytidylate kinase. | 0.563 |
| GLE_3618 | corC | GLE_3618 | GLE_3629 | ATP-binding protein. | Magnesium and cobalt efflux protein CorC. | 0.694 |
| GLE_3618 | era | GLE_3618 | GLE_1711 | ATP-binding protein. | GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.543 |
| GLE_3618 | miaB | GLE_3618 | GLE_3604 | ATP-binding protein. | tRNA-I(6)A37 thiotransferase enzyme MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine. | 0.532 |
| GLE_3618 | recO | GLE_3618 | GLE_1712 | ATP-binding protein. | DNA repair protein; Involved in DNA repair and RecF pathway recombination. | 0.793 |
| GLE_3618 | rimP | GLE_3618 | GLE_2174 | ATP-binding protein. | UPF0090 protein, YhbC family; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family. | 0.542 |
| GLE_3618 | sun | GLE_3618 | GLE_0358 | ATP-binding protein. | Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 0.652 |
| GLE_3618 | tadA | GLE_3618 | GLE_2885 | ATP-binding protein. | tRNA-specific adenosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. | 0.552 |
| GLE_3618 | ybeY | GLE_3618 | GLE_3619 | ATP-binding protein. | UPF0054 protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.985 |
| clpX | GLE_3618 | GLE_3418 | GLE_3618 | ATP-dependent Clp protease, ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. | ATP-binding protein. | 0.605 |
| cmk | GLE_3618 | GLE_2926 | GLE_3618 | Cytidylate kinase. | ATP-binding protein. | 0.563 |
| cmk | era | GLE_2926 | GLE_1711 | Cytidylate kinase. | GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.505 |
| cmk | tadA | GLE_2926 | GLE_2885 | Cytidylate kinase. | tRNA-specific adenosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. | 0.498 |
| corC | GLE_3618 | GLE_3629 | GLE_3618 | Magnesium and cobalt efflux protein CorC. | ATP-binding protein. | 0.694 |
| corC | ybeY | GLE_3629 | GLE_3619 | Magnesium and cobalt efflux protein CorC. | UPF0054 protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.886 |
| era | GLE_3618 | GLE_1711 | GLE_3618 | GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | ATP-binding protein. | 0.543 |
| era | cmk | GLE_1711 | GLE_2926 | GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | Cytidylate kinase. | 0.505 |
| era | recO | GLE_1711 | GLE_1712 | GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | DNA repair protein; Involved in DNA repair and RecF pathway recombination. | 0.936 |
| era | rimP | GLE_1711 | GLE_2174 | GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | UPF0090 protein, YhbC family; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family. | 0.483 |
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