STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE_3626Type IV pre-pilin like leader sequence. (175 aa)    
Predicted Functional Partners:
pilV-2
Type IV pilus assembly protein.
 
  
 0.962
pilW-2
Type IV pilus assembly protein.
 
  
  0.951
pilY1-2
Type IV pilus assembly protein.
 
  
 0.948
pilX-2
Type IV pilus assembly protein.
 
  
 0.925
pilE-2
Type IV pilus assembly protein.
 
  
  0.913
pilW
Type IV pilus assembly protein.
 
  
 0.839
pilV
Type IV pilus assembly protein.
 
  
 0.838
fimT
Type IV fimbrial biogenesis protein.
 
     0.836
pilY1
Type IV pilus assembly protein.
 
  
 0.820
pilP
Type IV assembly protein.
  
  
 0.794
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.