STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE_3626Type IV pre-pilin like leader sequence. (175 aa)    
Predicted Functional Partners:
pilV-2
Type IV pilus assembly protein.
 
  
 0.957
pilW-2
Type IV pilus assembly protein.
 
  
  0.952
pilY1-2
Type IV pilus assembly protein.
 
  
 0.940
pilX-2
Type IV pilus assembly protein.
 
  
 0.916
pilE-2
Type IV pilus assembly protein.
 
  
  0.913
fimT
Type IV fimbrial biogenesis protein.
 
     0.836
pilW
Type IV pilus assembly protein.
 
  
 0.834
pilV
Type IV pilus assembly protein.
 
  
 0.817
pilE
Type IV pilus assembly protein.
 
  
  0.793
pilY1
Type IV pilus assembly protein.
 
  
 0.788
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.