STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE_3649endo-beta-N-acetylglucosaminidase H. (289 aa)    
Predicted Functional Partners:
GLE_4829
Peptidase, families S8 and S53.
   
 0.766
GLE_2271
Beta-hexosaminidase.
 
  
 0.565
GLE_4029
Glycosyltransferase family 36.
   
 
 0.558
GLE_5161
Beta-hexosaminidase.
 
  
 0.550
ccoP
Cytochrome c oxidase, subunit III.
    
  0.502
cyoC
Cytochrome o ubiquinol oxidase, subunit III.
    
  0.502
ccoO
Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
    
  0.500
cyoA
Ubiquinol oxidase, subunit II.
    
  0.500
chiA2
Chitinase; Belongs to the glycosyl hydrolase 18 family.
  
 
 0.486
GLE_2053
Endochitinase GH fam 19.
  
  
 0.475
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.