Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
GLE_3649endo-beta-N-acetylglucosaminidase H. (289 aa)    
Predicted Functional Partners:
GLE_4829
Peptidase, families S8 and S53.
   
 0.828
GLE_4029
Glycosyltransferase family 36.
     
 0.555
GLE_2271
Beta-hexosaminidase.
  
  
 0.553
tkB
Transketolase.
     
  0.545
GLE_5161
Beta-hexosaminidase.
  
  
 0.539
chiA2
Chitinase; Belongs to the glycosyl hydrolase 18 family.
  
 
 0.469
GLE_3650
Hypothetical protein.
       0.465
GLE_2053
Endochitinase GH fam 19.
  
  
 0.454
GLE_0379
Hypothetical protein.
  
  
  0.430
ccoO
Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
    
  0.406
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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