STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE_3654Glycosyl hydrolase, family 31. (1133 aa)    
Predicted Functional Partners:
GLE_2523
Beta-glucosidase.
 
  
 0.903
GLE_5129
Glycosyl hydrolase, family 3.
 
  
 0.900
GLE_0338
Alpha,alpha-phosphotrehalase.
    
 0.894
scrK
Fructokinase-1.
  
 
 0.889
GLE_3653
TonB-dependent receptor.
 
     0.853
GLE_3657
N-acetyl-D-glucosamine kinase (GlcNAc kinase).
 
 
 0.846
GLE_2532
TonB-dependent receptor.
  
     0.750
GLE_1363
Type I phosphodiesterase / nucleotide pyrophosphatase family protein.
    
  0.743
rpsG
Ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.
   
   0.732
acnA
Aconitate hydratase 1; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate.
    
   0.721
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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