STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE_3659Aga operon transcriptional repressor. (260 aa)    
Predicted Functional Partners:
lacD
D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit.
    0.918
nagA
N-acetylglucosamine-6-phosphate deacetylase.
 
    0.845
GLE_3656
AgaS.
 
    0.775
GLE_1190
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2.
 
  
 0.680
GLE_0815
FAD dependent oxidoreductase.
 
  
 0.546
scrK
Fructokinase-1.
 
 
  0.527
GLE_3657
N-acetyl-D-glucosamine kinase (GlcNAc kinase).
       0.481
GLE_3654
Glycosyl hydrolase, family 31.
 
     0.470
rbsK
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
 
 
  0.441
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
 
  
 0.428
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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