Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GLE_3663Cellulase; Belongs to the glycosyl hydrolase 5 (cellulase A) family. (591 aa)    
Predicted Functional Partners:
GLE_5129
Glycosyl hydrolase, family 3.
 
  
 0.880
glk-2
Glucokinase; Belongs to the bacterial glucokinase family.
       0.777
GLE_3664
Pass1-related protein.
       0.773
GLE_3665
SapC.
       0.773
gluC
Beta glucanase C.
 
  
 0.700
GLE_4029
Glycosyltransferase family 36.
    
 0.689
GLE_2523
Beta-glucosidase.
 
  
 0.673
GLE_2459
Cellulase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
  
 
0.622
bgc
Beta-glucanase; Belongs to the glycosyl hydrolase 8 (cellulase D) family.
  
   
 0.622
chiA1
Chitinase A.
  
  
 0.583
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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