STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE_3675Non-ribosomal peptide synthase domain protein. (9289 aa)    
Predicted Functional Partners:
GLE_3677
MbtH family protein.
 
  0.913
GLE_2497
mbtH family protein.
  
  0.824
GLE_3676
Linear gramicidin synthetase subunit C.
 
    
0.804
GLE_4894
Amino acid adenylation domain protein.
 
0.800
lgrE
Linear gramicidin dehydrogenase LgrE.
  
  
  0.763
GLE_2555
Thioesterase domain.
  
  
  0.762
GLE_2495
Beta-ketoacyl synthase/short chain dehydrogenase/methyltransferase domain.
  
     0.741
GLE_3674
Taurine catabolism dioxygenase TauD/TfdA.
 
    0.671
GLE_2622
Isochorismatase.
  
  
  0.669
GLE_2995
NAD dependent epimerase/dehydratase family.
   
 0.623
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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