STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE_3696General stress protein. (161 aa)    
Predicted Functional Partners:
GLE_3695
Hypothetical protein.
 
     0.862
GLE_2210
NAD dependent epimerase/dehydratase family.
   
    0.743
GLE_2596
Hypothetical protein; Belongs to the UPF0337 (CsbD) family.
  
    0.714
GLE_4331
Hypothetical protein; Belongs to the UPF0337 (CsbD) family.
  
    0.714
GLE_3105
Acetyltransferase.
  
    0.702
GLE_1413
NAD dependent epimerase/dehydratase family.
  
    0.614
GLE_3819
PAS/GAF domain protein.
  
     0.591
ligD
DNA ligase D.
 
     0.508
GLE_2476
Hypothetical protein.
  
     0.504
ku
Ku protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.
 
     0.500
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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