STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
otsAAlpha,alpha-trehalose-phosphate synthase. (508 aa)    
Predicted Functional Partners:
otsB
Trehalose-phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
 
  
 0.985
pgmB
Beta-phosphoglucomutase.
    
 0.887
GLE_3710
Glycosyl transferase, group 1 family protein.
 
  
 0.833
GLE_3711
Amylo-alpha-1,6-glucosidase.
 
  
  0.809
GLE_2361
Transport-associated protein.
   
  
 0.722
galU
UTP-glucose-1-phosphate uridylyltransferase.
    
 0.675
GLE_0338
Alpha,alpha-phosphotrehalase.
 
  
 0.655
GLE_3712
Hypothetical protein.
       0.636
GLE_3713
Gp06 protein.
       0.636
GLE_2778
F5/8 type C domain.
    
 0.613
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.