Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GLE_3727Hypothetical protein. (3042 aa)    
Predicted Functional Partners:
GLE_3726
Hypothetical protein.
 
  0.951
GLE_0625
Hypothetical protein.
 
 
  0.809
GLE_3725
Hypothetical protein.
       0.584
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
  0.498
flgC
Flagellar basal-body rod protein; Belongs to the flagella basal body rod proteins family.
   
   0.462
tolB
Tol-Pal system beta propeller repeat protein TolB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
 0.442
GLE_0086
BNR repeat.
  
 
  0.439
GLE_4460
Hypothetical protein.
  
 
  0.423
GLE_5216
Hypothetical protein.
  
     0.416
GLE_1152
Hypothetical protein.
  
    0.414
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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