STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE_3860Transcriptional regulator, AraC family. (309 aa)    
Predicted Functional Partners:
GLE_0552
Transcriptional regulator, AraC family.
  
     0.735
GLE_1271
Transcriptional regulator, AraC family.
  
     0.735
GLE_1769
Transcriptional regulator, AraC family.
  
     0.728
GLE_3472
Transcriptional regulator, AraC family.
  
     0.726
GLE_2067
Transcriptional regulator, AraC family.
  
     0.725
GLE_4613
Transcriptional regulator, AraC family.
  
     0.679
GLE_0235
Transcriptional regulator, AraC family.
  
     0.652
GLE_0514
Transcriptional regulator, AraC family.
  
     0.639
GLE_3859
Hypothetical protein.
       0.615
gltB
Glutamine amidotransferases class-II/glutamate synthase.
    
  0.558
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.