STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
oxyRTranscriptional regulator, LysR family/LysR substrate binding domain; Belongs to the LysR transcriptional regulatory family. (316 aa)    
Predicted Functional Partners:
GLE_3886
Peroxiredoxin.
 
   
 0.756
GLE_5229
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.690
GLE_0897
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.656
GLE_1794
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.648
ycaN
HTH-type transcriptional regulator YcaN; Belongs to the LysR transcriptional regulatory family.
  
     0.624
GLE_5375
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.617
GLE_4774
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.605
GLE_2192
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.598
GLE_1412
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.593
GLE_0775
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.586
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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