STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE_3894Hypothetical protein. (90 aa)    
Predicted Functional Partners:
GLE_0632
Sensory box histidine kinase.
   
 0.813
GLE_0164
Sensory box histidine kinase.
   
 0.781
pheA
Chorismate mutase/prephenate dehydratase/ACT domain.
     
 0.751
glnS
glutaminyl-tRNA synthetase.
       0.633
GLE_2449
Histidine kinase.
    
 0.617
pilL
Hpt domain protein; Response regulator receiver domain/histidine kinase-, DNA gyrase B-, and HSP90-like ATPase/CheW-like domain.
   
 0.596
GLE_1142
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
    
 0.564
GLE_1143
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
    
 0.564
GLE_3067
Oxidoreductase.
     
  0.563
GLE_4392
Oxidoreductase.
     
  0.563
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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