STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE_3949Hypothetical protein. (486 aa)    
Predicted Functional Partners:
pilI
Type IV pilus assembly protein.
  
 0.954
cheW
Purine-binding chemotaxis protein Chew.
  
 0.949
GLE_3951
Response regulator receiver domain.
  
 0.942
pilK
Glutamate methyltransferase.
  
 0.875
GLE_0632
Sensory box histidine kinase.
  
 0.868
cheB
Protein-glutamate methylesterase CheB; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
  
 0.859
pilJ
Type IV pilus assembly protein.
  
 0.854
GLE_2453
Methyl-accepting chemotaxis protein (MCP) signaling domain.
  
 0.837
GLE_0164
Sensory box histidine kinase.
  
 0.802
GLE_3438
Diguanylate cyclase.
  
 
 0.790
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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