Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
dpsDNA protection during starvation protein; Belongs to the Dps family. (193 aa)    
Predicted Functional Partners:
clpS
ATP-dependent Clp protease adaptor protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family.
   
 
 0.919
GLE_1283
OsmC/Ohr family protein.
  
  
 0.697
GLE_4592
OsmC-like protein.
  
  
 0.668
wrbA
NAD(P)H:quinone oxidoreductase, type IV.
   
  
 0.654
wrbA-2
NAD(P)H:quinone oxidoreductase, type IV; Belongs to the WrbA family.
   
  
 0.654
GLE_3886
Peroxiredoxin.
  
  
 0.654
hrpA
ATP dependent RNA helicase.
       0.647
GLE_2786
Morphogene BolA protein; Belongs to the BolA/IbaG family.
   
  
 0.619
GLE_5395
LysM/phospholipid-binding domain protein.
   
    0.574
raiA
Ribosomal subunit interface protein.
   
    0.542
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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