STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pilAType IV pilus assembly protein; Belongs to the N-Me-Phe pilin family. (147 aa)    
Predicted Functional Partners:
GLE_4177
General secretion pathway protein J.
  
 0.846
pilC
Type IV pilus assembly protein.
 
  
 0.836
pilB
Type IV pilus assembly protein.
 
 0.821
gspK
General secretion pathway protein K.
  
 
 0.760
pilQ
Type IV assembly protein.
 
   
 0.733
pilD
Type IV prepilin-like proteins leader peptide-processing enzyme; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
  
 0.716
GLE_0351
Fimbrial protein.
 
 
0.680
pilM
Type IV pilus assembly protein.
 
   
 0.661
pilN
Type IV pilus assembly protein.
 
  
 0.648
GLE_3580
Type IV pre-pilin like leader sequence.
  
  
  0.637
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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