Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GLE_4143Lipoprotein, LppC family. (450 aa)    
Predicted Functional Partners:
mrcA
Penicillin-binding protein 1A.
  
 
 
 0.889
GLE_4144
Hypothetical protein; Belongs to the UPF0102 family.
  
  
 0.801
zipA
Cell division protein ZipA; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins.
  
   
 0.762
GLE_1221
Hypothetical protein.
  
     0.751
GLE_1200
Hypothetical protein.
  
     0.686
GLE_5037
hemY-like protein.
  
     0.663
GLE_0205
Hypothetical protein.
  
    0.655
GLE_3406
Hypothetical protein.
  
     0.652
GLE_4146
D-lactate dehydrogenase.
       0.640
GLE_0727
Hypothetical protein.
  
     0.626
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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