STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE_4146D-lactate dehydrogenase. (464 aa)    
Predicted Functional Partners:
glcF
Glycolate oxidase, iron-sulfur subunit protein.
 
 0.891
GLE_4145
Inner membrane protein YbcI.
       0.801
maeB
NADP-dependent malic enzyme.
  
 
 0.719
GLE_4144
Hypothetical protein; Belongs to the UPF0102 family.
       0.695
gltB
Glutamine amidotransferases class-II/glutamate synthase.
    
 0.660
etfA
Electron transfer flavoprotein subunit alpha.
  
 0.657
tkB
Transketolase.
    
 0.655
GLE_4143
Lipoprotein, LppC family.
       0.640
etfB
Electron transfer flavoprotein beta subunit.
  
 0.634
GLE_2141
D-isomer specific 2-hydroxyacid dehydrogenase.
 
 
 0.618
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.