STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE_4162Aspartyl/asparaginyl beta-hydroxylase family. (300 aa)    
Predicted Functional Partners:
GLE_4899
Sulfatase.
     
 0.907
fasD
Outer membrane usher protein.
  
    0.640
GLE_5456
Outer membrane usher protein.
  
    0.565
GLE_0102
Type I pili usher pathway.
  
     0.559
GLE_0103
Protein U domain protein.
  
     0.543
GLE_5455
Gram-negative pili assembly chaperone, N-terminal domain.
  
     0.525
GLE_0481
Membrane protein.
  
     0.466
GLE_0359
Dolichyl-phosphate-mannose-protein mannosyltransferase.
     
 0.457
GLE_0366
Lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase.
     
 0.418
lpxL
Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase; Catalyzes the transfer of laurate from lauroyl-acyl carrier protein (ACP) to Kdo(2)-lipid IV(A) to form Kdo(2)-(lauroyl)-lipid IV(A).
     
 0.418
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.