Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GLE_4170 | GLE_4171 | GLE_4170 | GLE_4171 | Glycosyl transferase, group 2 family protein. | Hypothetical protein. | 0.866 |
GLE_4170 | GLE_4177 | GLE_4170 | GLE_4177 | Glycosyl transferase, group 2 family protein. | General secretion pathway protein J. | 0.603 |
GLE_4170 | GLE_4178 | GLE_4170 | GLE_4178 | Glycosyl transferase, group 2 family protein. | General secretion pathway protein I. | 0.620 |
GLE_4170 | GLE_4298 | GLE_4170 | GLE_4298 | Glycosyl transferase, group 2 family protein. | NAD-dependent epimerase/dehydratase. | 0.836 |
GLE_4170 | gspD | GLE_4170 | GLE_4172 | Glycosyl transferase, group 2 family protein. | General secretion pathway protein D. | 0.629 |
GLE_4170 | gspH | GLE_4170 | GLE_4179 | Glycosyl transferase, group 2 family protein. | General secretion pathway protein H. | 0.658 |
GLE_4170 | gspK | GLE_4170 | GLE_4176 | Glycosyl transferase, group 2 family protein. | General secretion pathway protein K. | 0.637 |
GLE_4170 | gspL | GLE_4170 | GLE_4175 | Glycosyl transferase, group 2 family protein. | Fimbrial assembly protein. | 0.664 |
GLE_4170 | rfbC | GLE_4170 | GLE_3641 | Glycosyl transferase, group 2 family protein. | dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. | 0.642 |
GLE_4170 | rfbD | GLE_4170 | GLE_3640 | Glycosyl transferase, group 2 family protein. | dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family. | 0.739 |
GLE_4171 | GLE_4170 | GLE_4171 | GLE_4170 | Hypothetical protein. | Glycosyl transferase, group 2 family protein. | 0.866 |
GLE_4171 | GLE_4177 | GLE_4171 | GLE_4177 | Hypothetical protein. | General secretion pathway protein J. | 0.415 |
GLE_4171 | GLE_4178 | GLE_4171 | GLE_4178 | Hypothetical protein. | General secretion pathway protein I. | 0.573 |
GLE_4171 | gspD | GLE_4171 | GLE_4172 | Hypothetical protein. | General secretion pathway protein D. | 0.683 |
GLE_4171 | gspH | GLE_4171 | GLE_4179 | Hypothetical protein. | General secretion pathway protein H. | 0.612 |
GLE_4171 | gspK | GLE_4171 | GLE_4176 | Hypothetical protein. | General secretion pathway protein K. | 0.573 |
GLE_4171 | gspL | GLE_4171 | GLE_4175 | Hypothetical protein. | Fimbrial assembly protein. | 0.721 |
GLE_4177 | GLE_4170 | GLE_4177 | GLE_4170 | General secretion pathway protein J. | Glycosyl transferase, group 2 family protein. | 0.603 |
GLE_4177 | GLE_4171 | GLE_4177 | GLE_4171 | General secretion pathway protein J. | Hypothetical protein. | 0.415 |
GLE_4177 | GLE_4178 | GLE_4177 | GLE_4178 | General secretion pathway protein J. | General secretion pathway protein I. | 0.996 |
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