STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gspEGeneral secretory pathway protein E; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. (588 aa)    
Predicted Functional Partners:
gspF
General secretion pathway protein F.
 
 0.995
pilC
Type IV pilus assembly protein.
 
 0.967
gspG
General secretion pathway protein G.
 
 0.949
gspD
General secretion pathway protein D.
 
  
 0.905
pilN
Type IV pilus assembly protein.
   
 
 0.881
pilD
Type IV prepilin-like proteins leader peptide-processing enzyme; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
 
 0.876
GLE_4178
General secretion pathway protein I.
 
 0.871
pilZ-2
Type IV pilus assembly protein PilZ.
    
 
 0.845
gspL
Fimbrial assembly protein.
 
 
 
 0.814
pilB
Type IV pilus assembly protein.
  
  
 
0.798
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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