STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE_4205Membrane protein. (453 aa)    
Predicted Functional Partners:
GLE_4207
Sensory box histidine kinase.
 
     0.660
algB
Alginate biosynthesis transcriptional regulatory protein AlgB.
       0.566
GLE_5295
Prolyl 4-hydroxylase, alpha subunit.
  
     0.565
GLE_3036
DNA internalization-related competence protein ComEC/Rec2.
  
    0.518
GLE_0800
O-Antigen Polymerase.
  
     0.506
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
  
    0.483
GLE_0164
Sensory box histidine kinase.
       0.478
GLE_4216
Hypothetical protein.
       0.474
GLE_5352
ABC transporter sodium permease, putative.
  
     0.472
GLE_4208
Efflux transporter, RND family, MFP subunit.
 
     0.458
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.