Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
GLE_4205Membrane protein. (453 aa)    
Predicted Functional Partners:
GLE_4207
Sensory box histidine kinase.
 
     0.637
algB
Alginate biosynthesis transcriptional regulatory protein AlgB.
       0.566
GLE_5295
Prolyl 4-hydroxylase, alpha subunit.
  
     0.565
GLE_0800
O-Antigen Polymerase.
  
     0.506
GLE_5352
ABC transporter sodium permease, putative.
  
     0.472
GLE_4208
Efflux transporter, RND family, MFP subunit.
 
     0.457
GLE_1024
Sensor histidine kinase.
  
     0.442
glyA
Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
     
 0.441
GLE_0364
Bacterial membrane flanked domain.
  
     0.404
GLE_4729
Hypothetical protein.
  
     0.404
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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