STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE_4282DNA-binding response regulator. (224 aa)    
Predicted Functional Partners:
GLE_0632
Sensory box histidine kinase.
 
 0.949
GLE_4281
Sensor histidine kinase.
  0.933
GLE_1781
Putative heavy metal histidine sensor kinase; Member of a two-component regulatory system.
 
  0.922
GLE_4341
Sensor histidine kinase.
 
 0.908
GLE_4322
Sensor histidine kinase.
 
  0.876
GLE_2565
Histidine kinase.
  
  0.810
GLE_4753
Sensor histidine kinase.
  
  0.810
GLE_5248
Sensor histidine kinase.
 
  0.807
GLE_0593
Histidine kinase family protein.
  
  0.789
GLE_1142
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
0.776
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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