Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
GLE_0593 | GLE_0632 | Histidine kinase family protein. | Sensory box histidine kinase. | 0.836 |
GLE_0593 | GLE_1142 | Histidine kinase family protein. | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. | 0.573 |
GLE_0593 | GLE_1781 | Histidine kinase family protein. | Putative heavy metal histidine sensor kinase; Member of a two-component regulatory system. | 0.682 |
GLE_0593 | GLE_2565 | Histidine kinase family protein. | Histidine kinase. | 0.511 |
GLE_0593 | GLE_4282 | Histidine kinase family protein. | DNA-binding response regulator. | 0.789 |
GLE_0593 | GLE_4322 | Histidine kinase family protein. | Sensor histidine kinase. | 0.514 |
GLE_0593 | GLE_4753 | Histidine kinase family protein. | Sensor histidine kinase. | 0.790 |
GLE_0632 | GLE_0593 | Sensory box histidine kinase. | Histidine kinase family protein. | 0.836 |
GLE_0632 | GLE_1142 | Sensory box histidine kinase. | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. | 0.999 |
GLE_0632 | GLE_1781 | Sensory box histidine kinase. | Putative heavy metal histidine sensor kinase; Member of a two-component regulatory system. | 0.854 |
GLE_0632 | GLE_2565 | Sensory box histidine kinase. | Histidine kinase. | 0.835 |
GLE_0632 | GLE_4281 | Sensory box histidine kinase. | Sensor histidine kinase. | 0.844 |
GLE_0632 | GLE_4282 | Sensory box histidine kinase. | DNA-binding response regulator. | 0.949 |
GLE_0632 | GLE_4322 | Sensory box histidine kinase. | Sensor histidine kinase. | 0.851 |
GLE_0632 | GLE_4341 | Sensory box histidine kinase. | Sensor histidine kinase. | 0.801 |
GLE_0632 | GLE_4753 | Sensory box histidine kinase. | Sensor histidine kinase. | 0.848 |
GLE_0632 | GLE_5248 | Sensory box histidine kinase. | Sensor histidine kinase. | 0.801 |
GLE_1142 | GLE_0593 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. | Histidine kinase family protein. | 0.573 |
GLE_1142 | GLE_0632 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. | Sensory box histidine kinase. | 0.999 |
GLE_1142 | GLE_1781 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. | Putative heavy metal histidine sensor kinase; Member of a two-component regulatory system. | 0.737 |
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