Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GLE_4393Transcriptional regulator, TetR family. (228 aa)    
Predicted Functional Partners:
GLE_4391
Fatty acid desaturase.
 
  
 0.920
GLE_4392
Oxidoreductase.
 
  
 0.895
GLE_3067
Oxidoreductase.
 
  
 0.791
plsB
Acyltransferase; Belongs to the GPAT/DAPAT family.
  
   
 0.731
GLE_2350
Oxidoreductase, short chain dehydrogenase/reductase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.595
GLE_1918
PGAP1 family protein.
  
     0.583
GLE_1095
Hypothetical protein.
  
     0.572
GLE_2711
Hypothetical protein.
  
     0.556
GLE_2349
Phosphoglycerate mutase family protein.
  
     0.552
GLE_2995
NAD dependent epimerase/dehydratase family.
  
     0.449
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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