STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
recBCDExodeoxyribonuclease V. (164 aa)    
Predicted Functional Partners:
GLE_4455
Transport protein.
       0.773
ravA
ATPase RavA.
  
     0.692
GLE_4457
Haloacid dehalogenase-like hydrolase protein.
       0.586
GLE_4458
Cytosol aminopeptidase family, catalytic domain; Belongs to the peptidase M17 family.
       0.586
GLE_1664
Hypothetical protein.
  
     0.553
GLE_4459
Hypothetical protein.
       0.526
hemE
Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.
  
    0.521
GLE_1592
Hypothetical protein.
  
     0.516
GLE_5137
Oxidoreductase, 2OG-Fe(II) oxygenase family.
  
     0.439
GLE_1894
Oxidoreductase, 2OG-Fe(II) oxygenase family.
  
     0.429
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
Server load: low (28%) [HD]