STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE_4558Outer membrane efflux protein. (460 aa)    
Predicted Functional Partners:
GLE_4559
Efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.975
czcA
Cation efflux system protein czcA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.965
GLE_4561
Cation diffusion facilitator family transporter.
     
 0.641
GLE_4277
Hypothetical protein.
  
     0.584
GLE_4280
Hypothetical protein.
  
  
  0.558
GLE_3264
Auxiliary transport protein, membrane fusion protein (MFP) family.
  
 0.551
GLE_5413
HlyD secretion family protein.
  
 0.551
GLE_4278
Hypothetical protein.
  
     0.542
GLE_4279
Hypothetical protein.
  
     0.538
GLE_4557
Hypothetical protein.
       0.536
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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