STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE_4589Outer membrane autotransporter barrel domain protein. (2629 aa)    
Predicted Functional Partners:
GLE_1973
Serine protease, autotransporter barrel domain.
 
 
 0.742
GLE_4579
Peptidase, families S8 and S53/outer membrane autotransporter barrel domain.
 
0.720
GLE_1381
RNA methylase family; Belongs to the N(4)/N(6)-methyltransferase family.
  
     0.680
GLE_3850
Peptidase, families S8 and S53/PKD domain/proprotein convertase P-domain protein; Belongs to the peptidase S8 family.
  
 
 0.640
GLE_3988
POTRA domain, ShlB-type.
 
 0.614
GLE_2328
Hemolysin activation/secretion protein family.
 
 0.592
GLE_3093
Hemagglutinin.
  
   
 0.591
prtR
Transmembrane regulator PrtR.
  
     0.584
virB3
VirB3 protein.
   
    0.583
GLE_0845
Hemolysin-type calcium-binding repeat.
  
 
 0.575
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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