STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GLE_4600Hypothetical protein. (483 aa)    
Predicted Functional Partners:
tfdDII
Chloromuconate cycloisomerase.
 
   
 0.860
GLE_4603
Hypothetical protein.
 
     0.731
GLE_4914
Efflux ABC transporter, permease protein; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
   
 
 0.711
GLE_4598
TonB-dependent receptor.
 
     0.707
GLE_4602
Transcriptional regulator, RpiR family.
 
     0.672
GLE_0968
Lipoprotein.
  
     0.599
GLE_3634
Inner membrane protein.
 
     0.569
GLE_5352
ABC transporter sodium permease, putative.
  
     0.533
GLE_4599
Transglutaminase-like superfamily.
       0.485
ftsE
Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.
  
 
 0.483
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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