STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE_4606Creatinase/prolidase N-terminal domain/metallopeptidase family M24. (403 aa)    
Predicted Functional Partners:
GLE_4611
FAD dependent oxidoreductase.
 
  
  0.849
GLE_4608
Dihydrodipicolinate synthetase family; Belongs to the DapA family.
 
    0.822
GLE_4609
Pyridine nucleotide-disulfide oxidoreductase.
    
 0.819
GLE_4607
Aldehyde dehydrogenase (NAD) family protein.
   
 
 0.812
GLE_4610
Ferredoxin.
   
   0.779
GLE_4612
Proline racemase; Belongs to the proline racemase family.
 
     0.766
GLE_4423
TonB-dependent receptor domain protein.
  
     0.540
aroQ
3-dehydroquinate dehydratase, type II; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family.
 
 
  0.527
GLE_4613
Transcriptional regulator, AraC family.
       0.496
etfA
Electron transfer flavoprotein subunit alpha.
    
  0.469
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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