STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE_4611FAD dependent oxidoreductase. (366 aa)    
Predicted Functional Partners:
GLE_4609
Pyridine nucleotide-disulfide oxidoreductase.
 
 0.997
GLE_4612
Proline racemase; Belongs to the proline racemase family.
 
  
 0.992
GLE_4608
Dihydrodipicolinate synthetase family; Belongs to the DapA family.
 
  
  0.971
GLE_4610
Ferredoxin.
 
 
  0.959
GLE_4607
Aldehyde dehydrogenase (NAD) family protein.
 
  
  0.926
GLE_4606
Creatinase/prolidase N-terminal domain/metallopeptidase family M24.
 
  
  0.849
gltB
Glutamine amidotransferases class-II/glutamate synthase.
  
 
 0.837
alr
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
  
 
 0.741
GLE_3683
Dihydrodipicolinate synthetase family; Belongs to the DapA family.
 
  
  0.684
thiG
Thiazole biosynthesis protein ThiG; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.
 
 
 0.642
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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