STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
flhAFlagellar biosynthesis protein. (706 aa)    
Predicted Functional Partners:
flhB
Flagellar biosynthetic protein.
 
 0.972
epaR
Type III secretion apparatus protein.
 
 
 0.964
epaP
Type III secretion apparatus protein.
 
 
 0.958
fliR
Flagellar biosynthetic protein.
 
     0.949
fliQ
Flagellar biosynthetic protein.
 
     0.948
flgF
Flagellar basal-body rod protein.
 
     0.945
flgG
Flagellar basal-body rod protein.
 
     0.945
fliN
Flagellar motor switch protein.
 
  
 0.941
flgI
Flagellar P-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
 
     0.929
sctJ
Type III secretion apparatus lipoprotein.
 
 
 0.925
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.