STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fliMFlagellar C-ring protein. (279 aa)    
Predicted Functional Partners:
flgE
Flagellar hook protein.
       0.773
fliN
Flagellar motor switch protein.
       0.773
GLE_4639
Flagellar assembly protein FliH like.
       0.741
fliI
Flagellum-specific ATP synthase.
       0.741
GLE_4641
Hypothetical protein.
       0.741
GLE_4642
Hypothetical protein.
       0.741
flgD
Flagellar hook capping protein.
       0.741
fliO
Flagellar transmembrane protein.
       0.623
fliP
Flagellar biosynthetic protein; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.
       0.623
GLE_4649
RNA polymerase sigma factor, sigma-70 family.
       0.623
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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