Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GLE_4698N-acetylmuramoyl-L-alanine amidase. (534 aa)    
Predicted Functional Partners:
GLE_2868
CalU3.
  
     0.693
GLE_2867
CalU2.
  
     0.685
GLE_2871
CalU5.
  
     0.663
GLE_2869
CalU4.
  
     0.657
GLE_4705
M23 peptidase/bacterial SH3 domain protein.
 
     0.653
GLE_4706
SpoIID/LytB domain protein.
 
     0.648
GLE_2870
Coproporphyrinogen III oxidase family protein.
  
     0.551
GLE_4653
Tat (twin-arginine translocation) pathway signal sequence domain protein.
  
     0.551
chiA1
Chitinase A.
 
     0.539
GLE_4699
Peptide synthetase.
       0.535
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
Server load: medium (54%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.