Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GLE_4724Hypothetical protein. (168 aa)    
Predicted Functional Partners:
GLE_4398
Transcriptional regulator, ArsR family.
 
    0.818
GLE_5092
Transcriptional regulator, ArsR family.
 
    0.768
GLE_2122
Transcriptional regulator, ArsR family.
 
    0.757
GLE_0854
Transcriptional regulator, AraC family.
  
     0.558
GLE_4399
Hypothetical protein.
  
     0.474
GLE_1391
Transcriptional regulator, ArsR family.
 
    0.466
GLE_4886
Arsenical resistance operon repressor.
 
    0.438
tsaA
Hypothetical protein.
       0.427
GLE_4722
ABC-2 type transporter.
       0.420
GLE_4723
ABC transporter, ATP-binding protein.
       0.420
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.