STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE_4785Hypothetical protein. (424 aa)    
Predicted Functional Partners:
GLE_2988
Hypothetical protein.
  
     0.669
engC
Ribosome associated GTPase; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.
       0.637
GLE_0400
Glutaredoxin domain protein.
  
     0.574
GLE_0865
Serine/threonine protein kinase protein family.
   
    0.525
GLE_0716
TfoX C- domain superfamily.
  
     0.503
GLE_4789
GDSL-like Lipase/Acylhydrolase.
 
     0.496
GLE_0800
O-Antigen Polymerase.
  
     0.477
GLE_2987
FHA domain.
  
     0.447
GLE_4788
Aminotransferase class I and II/beta-eliminating lyase.
       0.433
GLE_4787
Hypothetical protein.
       0.422
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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