Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GLE_4794Polysaccharide deacetylase. (261 aa)    
Predicted Functional Partners:
GLE_3348
Polysaccharide deacetylase.
  
     0.744
GLE_4795
Glutaredoxin.
       0.554
GLE_4790
Methyltransferase; Catalyzes the conversion of S-adenosyl-L-methionine (SAM) to carboxy-S-adenosyl-L-methionine (Cx-SAM). Belongs to the class I-like SAM-binding methyltransferase superfamily. Cx-SAM synthase family.
  
     0.476
GLE_4973
Membrane protein.
 
     0.449
GLE_4972
Phosphotransferase family protein.
 
     0.420
GLE_4968
Hypothetical protein.
 
     0.418
GLE_0180
AMP-binding protein.
 
     0.416
GLE_4978
Hypothetical protein.
 
     0.416
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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