STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE_4848Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (314 aa)    
Predicted Functional Partners:
GLE_4774
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.762
GLE_5406
Putative HTH-type transcriptional regulator YcaN; Belongs to the LysR transcriptional regulatory family.
  
     0.542
GLE_4849
Integral membrane protein DUF6.
       0.530
GLE_0568
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.509
ycaN
HTH-type transcriptional regulator YcaN; Belongs to the LysR transcriptional regulatory family.
  
     0.509
GLE_0496
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.495
GLE_0897
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.490
GLE_1794
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.488
GLE_4773
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.486
GLE_4413
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.483
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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